Catalogue of the Rust Fungi of Belgium
最新版本 由 Meise Botanic Garden 發佈於 2019年3月19日 Meise Botanic Garden

The catalogue of rust fungi in Belgium is a species checklist dataset published by the Botanic Garden Meise. It contains information on 237 native and non-native species of rust fungi occurring in Belgium. The catalogue is the result of literature review and herbarium inspection of the main public Belgian herbaria, complemented with specimens from private herbaria. The checklist has been published as three separate volumes by Vanderweyen & Fraiture (2006, 2008 and 2011). Here it is published as a standardized Darwin Core Archive and includes for each rust fungus: the scientific name, higher classification, full bibliographic reference and stable taxon ID (in the taxon core), the occurrence status, whether the species is native or introduced (establishment) and date of first and last recorded observation in Belgium (given as a date range in the event date in the distribution extension). In the taxon core, we also provide the taxonomic information (scientific name and higher classification) of all 518 recorded host plant species and link those to their pathogenic rust fungus/fungi in the resource relationship extension. Issues with the dataset can be reported at: https://github.com/trias-project/uredinales-belgium-checklist

We have released this dataset to the public domain under a Creative Commons Zero waiver. We would appreciate it if you follow the GBIF citation guidelines (https://www.gbif.org/citation-guidelines) when using the data. If you have any questions regarding this dataset, don't hesitate to contact us via the contact information provided in the metadata or via https://twitter.com/trias_project.

GBIF DwC-A EML RTF 版本 權利 引用此資源
資料紀錄

此資源名錄的資料已發佈為達爾文核心集檔案(DwC-A),其以一或多組資料表構成分享生物多樣性資料的標準格式。 核心資料表包含 755 筆紀錄。

亦存在 2 筆延伸集的資料表。延伸集中的紀錄補充核心集中紀錄的額外資訊。 每個延伸集資料表中資料筆數顯示如下。

  • Taxon (核心)
    755
  • ResourceRelationship 
    677
  • Distribution 
    237

此 IPT 存放資料以提供資料儲存庫服務。資料與資源的詮釋資料可由「下載」單元下載。「版本」表格列出此資源的其它公開版本,以便利追蹤其隨時間的變更。

下載

下載最新版本的 Darwin Core Archive (DwC-A) 資源,或資源詮釋資料的 EML 或 RTF 文字檔。

DwC-A資料集 下載 755 紀錄 在 English 中 (78 kB) - 更新頻率: 無計畫更新
元數據EML檔 下載 在 English 中 (19 kB)
元數據RTF文字檔 下載 在 English 中 (17 kB)
版本

以下的表格只顯示可公開存取資源的已發布版本。

如何引用

研究者應依照以下指示引用此資源。:

Vanderweyen A, Fraiture A, Groom Q, Desmet P, Reyserhove L (2018): Catalogue of the Rust Fungi of Belgium. v1.2. Botanic Garden Meise. Dataset/Checklist. https://doi.org/10.15468/2dboyn

權利

研究者應尊重以下權利聲明。:

此資料的發布者及權利單位為 Meise Botanic Garden。 To the extent possible under law, the publisher has waived all rights to these data and has dedicated them to the Public Domain (CC0 1.0). Users may copy, modify, distribute and use the work, including for commercial purposes, without restriction.

GBIF 註冊

此資源已向GBIF註冊,並指定以下之GBIF UUID: b043c480-dd36-4f4f-aa82-e188753ff09d。  Meise Botanic Garden 發佈此資源,並經由Belgian Biodiversity Platform同意向GBIF註冊成為資料發佈者。

關鍵字

Checklist; Inventorythematic; checklist; inventory; rust fungi; rusts; Uredinales; host plants; plant pathogens; Belgium; TrIAS

聯絡資訊

資源建立者:

Arthur Vanderweyen
Researcher
Botanic Garden Meise
BE
André Fraiture
Researcher
Botanic Garden Meise
BE
Quentin Groom
Peter Desmet
Open data coordinator
Research Institute for Nature and Forest (INBO)
BE
Lien Reyserhove
Data Publisher
Research Institute for Nature and Forest (INBO)
BE

可回覆此資源相關問題者:

André Fraiture
Researcher
Botanic Garden Meise
BE

元數據填寫者:

Lien Reyserhove
Data Publisher
Research Institute for Nature and Forest (INBO)
BE
Peter Desmet
Open data coordinator
Research Institute for Nature and Forest (INBO)
BE
地理涵蓋範圍

This checklist covers all rust fungi recorded in Belgium. However, the presence of several species must still be confirmed because they are attested only by herbarium specimens or literature.

界定座標範圍 緯度南界 經度西界 [49.49, 2.53], 緯度北界 經度東界 [51.51, 6.41]
分類群涵蓋範圍

This dataset includes pathogenic rust fungi, i.e. fungi belonging to the order Pucciniales (previously also known as Uredinales), and their known host plants in Belgium. In total, 237 Uredinales species have been recorded in Belgium of which 26 are confirmed as ‘alien’ and 52 as ‘native’. The largest proportion of rust fungi belongs to the Pucciniaceae (78%), followed by the Melampsoraceae (6%) and Phragmidiaceae (6%). Small fractions are classified under the Coleosporiaceae, Pucciniastraceae, Cronartiaceae, Chaconiaceae, Uropyxidaceae, Uropyxidaceae, Raveneliaceae and Chaconiaceae.

Kingdom  Fungi
Phylum  Basidiomycota
時間涵蓋範圍
起始日期 / 結束日期 1850-01-01 / 2012-12-31
計畫資料

Imagine a future where dynamically, from year to year, we can track the progression of alien species (AS), identify emerging species, assess their current and future risk and timely inform policy in a seamless data-driven workflow. One that is built on open science and open data infrastructures. By using international biodiversity standards and facilities, we would ensure interoperability, repeatability and sustainability. This would make the process adaptable to future requirements in an evolving IAS policy landscape both locally and internationally. The project Tracking Invasive Alien Species (TrIAS) aims to do this for Belgium. For a full project description, see Vanderhoeven et al. (2017, https://doi.org/10.3897/rio.3.e13414).

計畫名稱 Tracking Invasive Alien Species (TrIAS)
辨識碼 TrIAS
經費來源 TrIAS is funded by the Belgian Science Policy Office (BELSPO) call for Belgian Research Action through Interdisciplinary Networks (BRAIN).
研究區域描述 Belgium.
研究設計描述 The project builds on two components: 1) The establishment of a data mobilization framework for alien species data from diverse data sources and 2) the development of data-driven procedures for risk evaluation based on risk modelling, risk mapping and risk assessment. TrIAS uses facilities from the Global Biodiversity Information Facility (GBIF, http://www.gbif.org), standards from the Biodiversity Information Standards organization (TDWG, http://www.tdwg.org) and expertise from Lifewatch (http://www.lifewatch.be) to create and facilitate a systematic workflow. Alien species data are gathered from a large set of regional, national and international initiatives, including citizen science data, with a wide taxonomic scope from marine, terrestrial and freshwater environments. Observation data are funnelled in repeatable ways to GBIF. In parallel, a Belgian checklist of alien species is established, benefiting from various taxonomic and project-based checklists foreseen for GBIF publication.

參與計畫的人員:

研究主持人
Quentin Groom
作者
Diederik Strubbe
作者
Sonia Vanderhoeven
取樣方法

See Vanderweyen & Fraiture (2007)

研究範圍 See Vanderweyen & Fraiture (2007)
品質控管 See step description.

方法步驟描述:

  1. The source data for this standardized checklist are the publications Vanderweyen & Fraiture (2007, 2008, 2011) which were manually transcribed to a tab-delimited text file.
  2. This raw data file was uploaded to a GitHub repository (https://github.com/trias-project/uredinales-belgium-checklist). See https://trias-project.github.io/uredinales-belgium-checklist for an introduction to this repository and the mapping of this dataset.
  3. We developed a RMarkdown script to document and perform the transformation of the data to Darwin Core, which includes the following steps:
  4. Perform some basic data cleaning of the raw data.
  5. Generate stable and unique identifiers for each taxon (taxonID).
  6. Generate the full bibliographic citations (bibliographicCitation).
  7. Create a taxon core file (http://rs.gbif.org/core/dwc_taxon.xml). The taxon core provides the taxonomic information for both rust fungi and their recorded host plants.
  8. Create a distribution extension file (http://rs.gbif.org/extension/gbif/1.0/distribution.xml), including standardization of the distribution date range.
  9. Create a resource relationship extension file (http://rs.gbif.org/extension/dwc/resource_relation_2018_01_18.xml), with information about the interactions between the pathogen (rust fungus) and host plant.
  10. The resulting Darwin Core data files are uploaded to the INBO IPT and documented with metadata.
  11. The dataset is published and registered with GBIF.
引用文獻
  1. Vanderweyen A, Fraiture A. (2011) Catalogue des Uredinals de Belgique (3ème partie). Puccinaceae (genre Puccinia). Lejeunia 189: 1-65.
  2. Vanderweyen A, Fraiture A. (2008) Catalogue des Uredinals de Belgique (2ème partie). Puccinaceae (sauf Puccinia). Lejeunia 185: 1-31.
  3. Vanderweyen A., Fraiture A. (2007) Catalogue des Uredinals de Belgique. (1st partie). Chaconiaceae, Coleosporiaceae, Cronartiaceae, Melampsoraceae, Phragmidiaceae, Pucciniastraceae, Raveneliaceae et Uropyxidaceae. Lejeunia 183: 1-36.
  4. Vanderhoeven S, Adriaens T, Desmet P, Strubbe D, Backeljau T, Barbier Y, Brosens D, Cigar J, Coupremanne M, De Troch R, Eggermont H, Heughebaert A, Hostens K, Huybrechts P, Jacquemart A, Lens L, Monty A, Paquet J, Prévot C, Robertson T, Termonia P, Van De Kerchove R, Van Hoey G, Van Schaeybroeck B, Vercayie D, Verleye T, Welby S, Groom Q (2017) Tracking Invasive Alien Species (TrIAS): Building a data-driven framework to inform policy. Research Ideas and Outcomes 3: e13414. https://doi.org/10.3897/rio.3.e13414
額外的元數據
目的 This dataset was published as open data for the TrIAS project (Tracking Invasive Alien Species http://trias-project.be, Vanderhoeven et al. 2017), with technical support provided by the Research Institute for Nature and Forest (INBO). It is selected as one of the authoritative sources for the compilation of a unified and standardized checklist of alien species in Belgium.
替代的識別碼 b043c480-dd36-4f4f-aa82-e188753ff09d
https://ipt.biodiversity.be/resource?r=uredinales-belgium-checklist